Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTGCAACCTCTGCC
..((((....(((((((((((&))))))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001348660
GeneSymbolC16orf87
Binding site4811,4828
Score0.923
Seed0
Au0.471
Energy-20.5
Binding len17
Me-11.113
Phylopstem-0.43139745454545453
Phylopflank-0.14974316303750004
Longest consecutive pairings11
Position of longest consecutive pairings6
Pairings in 3prime end8
Position3UTR
2D Structure