Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TTTATTCCAGGATCCAAGGAGCTGGTT
.(((((((((((((((((((((&))))).))))))....)))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDXM_047449171
GeneSymbolSEC22C
Binding site5643,5670
Score0.846
Seed1
Au0.515
Energy-22.9
Binding len27
Me-3.793
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end8
Position3UTR
2D Structure