Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCCACTGCCTGCAGCTGGAGG
((.((((((((((.((..(((&)))..)).))).))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047449171
GeneSymbolSEC22C
Binding site4375,4398
Score0.923
Seed0
Au0.426
Energy-22.3
Binding len23
Me-6.352
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings4
Pairings in 3prime end5
Position3UTR
2D Structure