Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGCGACTGGCCCAGTATCCAGGTCGAGGTTCTGCAGA
(((((((((((((((((((((&))))))))))))...)))................)))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047449171
GeneSymbolSEC22C
Binding site147,188
Score0.923
Seed1
Au0.515
Energy-22.3
Binding len41
Me-3.938
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings12
Position of longest consecutive pairings29
Pairings in 3prime end8
Position5UTR
2D Structure