Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTTTACAGATCCGCTTGGGAGGGGCTGCT
..(((((((((((((((((((&)))))))))..))))........)))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047449171
GeneSymbolSEC22C
Binding site1918,1948
Score0.923
Seed1
Au0.471
Energy-22.3
Binding len30
Me-4.957
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings21
Pairings in 3prime end8
Position3UTR
2D Structure