Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTACAAGTGGCCGGGC
.((((((.(((..(((((....&))))).))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDXM_047449470
GeneSymbolCLSTN1
Binding site4389,4405
Score0.846
Seed1
Au0.471
Energy-17.8
Binding len16
Me-10.743
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure