Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCGGCAGCAGCAGCTGGAGT
((.(((((((.(((((..(((&)))..))))).))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047449470
GeneSymbolCLSTN1
Binding site3604,3626
Score0.846
Seed0
Au0.338
Energy-23.2
Binding len22
Me-8.32
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings4
Pairings in 3prime end6
PositionCDS
2D Structure