Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCGGGGCAAGTGTCTTCATGAACCCAGAGGATGTCCGGG
..((((((((..(((((((...&.)))))))))).).)))).
Details
MiRNAhsa-miR-892b
RefseqIDXM_047449476
GeneSymbolTSPAN5
Binding site352,394
Score0.846
Seed1
Au0.441
Energy-20.5
Binding len19
Me-11.129
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings8
Pairings in 3prime end5
Position5UTR
2D Structure