Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGCAGCATCCGCAGCG
.....(((((((.(((..(((&)))...))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047449478
GeneSymbolFOXJ3
Binding site1205,1223
Score0.846
Seed0
Au0.353
Energy-20.6
Binding len18
Me-14.955
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure