Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTCAGCCTGCAGAAGGCAGA
((((..(((((((((.(((((&)))))))))).))))...)))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047449529
GeneSymbolPAICS
Binding site5929,5952
Score0.846
Seed0
Au0.441
Energy-21.8
Binding len23
Me-10.191
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings13
Pairings in 3prime end7
Position3UTR
2D Structure