Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGTTCAACCGTACTTTCTCCAGAAGGATCAGCTCAATTTGCTGCT
..(((((((((((((...(((&)))...))))))))...........................))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047449529
GeneSymbolPAICS
Binding site1186,1233
Score0.923
Seed1
Au0.574
Energy-19.0
Binding len47
Me-5.19
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings33
Pairings in 3prime end5
PositionCDS
2D Structure