Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGCACGCGTGCGTGCAT
.((((((((((..(((.((((&))))))))))).)).)))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047449545
GeneSymbolNPFFR2
Binding site1242,1262
Score0.885
Seed1
Au0.515
Energy-16.9
Binding len20
Me-8.429
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings9
Pairings in 3prime end7
Position3UTR
2D Structure