Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TTTGCACCTAATTGCCAGGC
.(((((((.....((((((...&))))))......))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001348699
GeneSymbolSAXO2
Binding site2858,2878
Score0.846
Seed1
Au0.559
Energy-16.9
Binding len20
Me-13.553
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure