Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TTGCAACAGAGCTGTAGA
((((((((.(.(((((((...&))))))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001348705
GeneSymbolSAXO2
Binding site290,308
Score0.846
Seed1
Au0.529
Energy-18.0
Binding len18
Me-7.819
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure