Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACAGCTGCTTATTTCGGCTGTGAA
((((((((((((((((.....&)))))))).......)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001348712
GeneSymbolHTD2
Binding site177,201
Score0.846
Seed1
Au0.471
Energy-18.8
Binding len24
Me-3.938
Phylopstem2.2919991782608697
Phylopflank2.5962519107499995
Longest consecutive pairings8
Position of longest consecutive pairings16
Pairings in 3prime end3
Position5UTR
2D Structure