Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGGGAGGTGGAGGATGCAGTGAGCTGAGACTGTGCAGCTGCAC
.(((((((((((((....(((&.)))..))))..))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_152440
GeneSymbolKICS2
Binding site3017,3063
Score0.923
Seed1
Au0.412
Energy-20.9
Binding len22
Me-4.762
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure