Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCCCAGACTAGCAGTTGCAGT
((((((((((((((....(((&)))....)))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_152449
GeneSymbolLYSMD4
Binding site1102,1125
Score0.846
Seed1
Au0.412
Energy-21.4
Binding len23
Me-4.906
Phylopstem5.0516364000000005
Phylopflank5.065886493750001
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure