Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCAGCCTCGCAAGTAGCTGGGAT
((.((((((((((((..((((&)))))))))......))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001348713
GeneSymbolHTD2
Binding site325,351
Score0.846
Seed0
Au0.456
Energy-20.1
Binding len26
Me-5.728
Phylopstem-0.3509169555555555
Phylopflank1.56532550375
Longest consecutive pairings9
Position of longest consecutive pairings17
Pairings in 3prime end6
Position5UTR
2D Structure