Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TCTTGTGGTCCAGAAGTTCCACAGAGCAACGCAGCTGCAT
.(((((((((.(((((...((&.))...)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_152455
GeneSymbolZSCAN29
Binding site4044,4084
Score1.0
Seed1
Au0.471
Energy-23.3
Binding len21
Me-6.618
Phylopstem1.5078695333333334
Phylopflank1.9747029006249996
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure