Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGGGGGTGCTGTGGCTGTC
..(((((((((((....((((&))))......))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001330492
GeneSymbolB3GNT4
Binding site2419,2441
Score0.846
Seed1
Au0.397
Energy-20.2
Binding len22
Me-6.782
Phylopstem-0.5048417272727272
Phylopflank0.13789097499999992
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure