Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TTGCTCAGGCTGGAGTACAGTGG
((((((((((..(((((((((.&)))))))))..))))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_152459
GeneSymbolC16orf89
Binding site1015,1038
Score0.923
Seed1
Au0.426
Energy-25.9
Binding len23
Me-10.109
Phylopstem0.5938670909090908
Phylopflank1.9494769995
Longest consecutive pairings9
Position of longest consecutive pairings14
Pairings in 3prime end7
PositionCDS
2D Structure