Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCAAGCAGCCGCTGAGACGGACGGTTCCATGCCAGCTGCC
..((((((((((((((..(((&)))..)))))))).....................)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_152459
GeneSymbolC16orf89
Binding site1476,1517
Score0.923
Seed1
Au0.382
Energy-23.8
Binding len41
Me-4.957
Phylopstem2.160604485714286
Phylopflank1.53395871125
Longest consecutive pairings8
Position of longest consecutive pairings28
Pairings in 3prime end6
Position3UTR
2D Structure