Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCAGGAGTTTCTCGGGCCCAGCTGTGGCTGCT
..(((((((((((((...(((&.)))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001348714
GeneSymbolHTD2
Binding site59,92
Score1.0
Seed1
Au0.324
Energy-23.6
Binding len18
Me-5.19
Phylopstem0.21009607692307686
Phylopflank-0.4387464662499999
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure