Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGGCCTGAAAGGCTGGCAAGTGGGAGGGAGTCAGTGG
(((((((((((((((((.(((.&))).))................))))))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_152470
GeneSymbolRNF165
Binding site3815,3853
Score0.846
Seed1
Au0.412
Energy-28.1
Binding len38
Me-3.938
Phylopstem0.09194718121212123
Phylopflank-0.046529715500000006
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure