Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTTGTGTGGCGGCAGCTGCGGC
((((((((((.(((..(((((&))))).....))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_152470
GeneSymbolRNF165
Binding site13,38
Score0.846
Seed1
Au0.313
Energy-24.4
Binding len25
Me-7.731
Phylopstem2.387531
Phylopflank2.0643775455882354
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure