Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCGAGAAGGGGGTCGGG
..(((((((((((((.(((...&))).))))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001348716
GeneSymbolKDM6B
Binding site5541,5559
Score1.0
Seed1
Au0.294
Energy-27.4
Binding len18
Me-5.19
Phylopstem1.1590517692307691
Phylopflank1.6952316849999998
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure