Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTGCAGCAAGGAGTTCTCCAAGACTGGGCAAT
((((((((.(.((((((((((&))))))))))..).))))............)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_152476
GeneSymbolZNF560
Binding site436,471
Score0.846
Seed1
Au0.529
Energy-19.0
Binding len35
Me-7.819
Phylopstem0.6378130999999998
Phylopflank-0.6971827375
Longest consecutive pairings10
Position of longest consecutive pairings25
Pairings in 3prime end8
PositionCDS
2D Structure