Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCCTCTAATTTGGGGGCAGCAGTT
.((((((((((....((((((.&))))))........))))))..)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_152478
GeneSymbolZNF583
Binding site2330,2357
Score0.846
Seed1
Au0.574
Energy-20.7
Binding len27
Me-10.022
Phylopstem-0.21327150000000003
Phylopflank0.27603308974999996
Longest consecutive pairings6
Position of longest consecutive pairings21
Pairings in 3prime end6
Position3UTR
2D Structure