Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGGTACACTGCGAGGGCTGTGCCCGGCGCCGCAGCGCAGG
((((.(((((((.(((..(((&.)))..)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001348716
GeneSymbolKDM6B
Binding site5313,5356
Score0.923
Seed0
Au0.265
Energy-23.5
Binding len21
Me-9.346
Phylopstem0.9034471428571429
Phylopflank1.4349282825
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure