Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTTACCTGAGAAAGGAAGAAATTTAATTCTACCAGTGA
((((((.(((((((((((((((&))).)))).))))))))...............)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_152487
GeneSymbolTLCD4
Binding site2627,2666
Score0.846
Seed0
Au0.706
Energy-22.5
Binding len39
Me-5.481
Phylopstem0.5200409
Phylopflank0.8596271812500001
Longest consecutive pairings8
Position of longest consecutive pairings22
Pairings in 3prime end8
Position3UTR
2D Structure