Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCCAAGGGGGAAAGCTAGTGT
(((((((((((((.(((((...&))))).))))))..))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_152491
GeneSymbolPM20D1
Binding site1618,1640
Score0.962
Seed1
Au0.529
Energy-24.1
Binding len22
Me-4.794
Phylopstem4.251082266666667
Phylopflank3.62250864625
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure