Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGCAGCTGCTGTCAGCC
..((.((.((((((((((((.&)))))))))))).))..)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_152491
GeneSymbolPM20D1
Binding site866,886
Score1.0
Seed0
Au0.485
Energy-21.7
Binding len20
Me-11.39
Phylopstem2.3824745000000003
Phylopflank1.9138011050000001
Longest consecutive pairings12
Position of longest consecutive pairings8
Pairings in 3prime end7
PositionCDS
2D Structure