Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCAGAACCACCTGCAGAGGTGGAAGCAGCTGCAGG
((((((((((..((((.((((&.))))))))........)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_152492
GeneSymbolCCDC27
Binding site1659,1695
Score0.846
Seed1
Au0.471
Energy-22.9
Binding len28
Me-10.109
Phylopstem0.35655881
Phylopflank0.24887187999999993
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure