Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTCCGCGCCACCCGCTGGCGGATATCCTGCACCGCGGCTGCC
..((((((((((.((((.(((&.))).)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_152494
GeneSymbolDCST1
Binding site1959,2002
Score0.923
Seed1
Au0.206
Energy-25.7
Binding len20
Me-6.246
Phylopstem0.46121909999999994
Phylopflank0.6995262474999999
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure