Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGGCACCTGTGACCTGGTATTGGAGCCAGTC
.(((((((((..(((((((...&.)))))).)..))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_152504
GeneSymbolSHLD1
Binding site837,869
Score1.0
Seed1
Au0.426
Energy-25.4
Binding len21
Me-9.965
Phylopstem-0.36578364444444444
Phylopflank0.08745058875000003
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure