Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCGGGTGATCTTCAACCGGGACGGCTGCT
..(((((((((((((.(((((&.)))))))))))...))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_152504
GeneSymbolSHLD1
Binding site524,555
Score0.923
Seed1
Au0.412
Energy-23.7
Binding len23
Me-5.19
Phylopstem1.6364084375000003
Phylopflank1.0962020862500002
Longest consecutive pairings11
Position of longest consecutive pairings11
Pairings in 3prime end7
PositionCDS
2D Structure