Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGATACATTCCTACAATGGCCACTGCT
..((((..((.(((((.(((.&.)))))))).))..)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_152510
GeneSymbolHORMAD2
Binding site48,77
Score0.846
Seed0
Au0.603
Energy-18.5
Binding len19
Me-11.639
Phylopstem0.42822799999999994
Phylopflank0.595812041125
Longest consecutive pairings8
Position of longest consecutive pairings10
Pairings in 3prime end6
Position5UTR
2D Structure