Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATCTGCTTGCAATCTGCCAGGA
.(((((((..(((.((((((..&))))))))).....))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_152513
GeneSymbolMEI1
Binding site2260,2282
Score0.846
Seed1
Au0.544
Energy-18.7
Binding len22
Me-6.949
Phylopstem2.416044285714286
Phylopflank1.51365926125
Longest consecutive pairings9
Position of longest consecutive pairings13
Pairings in 3prime end6
PositionCDS
2D Structure