Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTGCAGCCAAGGGAAAACTGA
...(((((..(((((((((((&)))))))))))..)).....))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_152515
GeneSymbolCKAP2L
Binding site75,99
Score0.923
Seed0
Au0.559
Energy-18.5
Binding len24
Me-8.813
Phylopstem0.12641509090909092
Phylopflank0.18960406249999992
Longest consecutive pairings11
Position of longest consecutive pairings13
Pairings in 3prime end8
PositionCDS
2D Structure