Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCCGGAACTGGAGCAGTA
.(((.(((((.((((((((...&))))))))..)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_152517
GeneSymbolTTC30B
Binding site256,275
Score0.846
Seed0
Au0.338
Energy-23.6
Binding len19
Me-10.737
Phylopstem0.039864550000000026
Phylopflank0.20310048375000003
Longest consecutive pairings8
Position of longest consecutive pairings11
Pairings in 3prime end5
PositionCDS
2D Structure