Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAGCTGGGCCAGCTGCAC
.(((((((((((((((.....&)))))))...)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_152517
GeneSymbolTTC30B
Binding site239,258
Score0.846
Seed1
Au0.338
Energy-21.6
Binding len19
Me-3.793
Phylopstem0.0854403111111111
Phylopflank0.23742203125000005
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure