Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GGGTCTTACTGCGTTGTCCAGGC
.(((((...(((((((((....&.)))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_152523
GeneSymbolCCNYL1
Binding site2032,2055
Score0.923
Seed0
Au0.5
Energy-18.8
Binding len16
Me-8.707
Phylopstem-0.2781747777777778
Phylopflank0.17571941875
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure