Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGGAGGTCAAGGCTGCAGTGG
((((((((.((((((((((...&))))))))))....)))..))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_152523
GeneSymbolCCNYL1
Binding site2687,2712
Score0.923
Seed1
Au0.426
Energy-22.9
Binding len25
Me-4.994
Phylopstem-0.2837916
Phylopflank0.1090254125
Longest consecutive pairings10
Position of longest consecutive pairings15
Pairings in 3prime end5
Position3UTR
2D Structure