Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CCCGGCGCGAAGGCCAAGAGCTTGGAGGGCGGCGGTGCCGGGCCGGTGG
(((((((((((((((((((...&.))))))))))..........))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_152531
GeneSymbolXXYLT1
Binding site344,393
Score0.923
Seed1
Au0.353
Energy-23.4
Binding len31
Me-3.938
Phylopstem-0.15755227586206894
Phylopflank-0.04109149999999999
Longest consecutive pairings10
Position of longest consecutive pairings20
Pairings in 3prime end5
PositionCDS
2D Structure