Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGGAACCGGCAGCTGTG
..((((((((((((.(.((((&))))).))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_152531
GeneSymbolXXYLT1
Binding site1151,1171
Score0.923
Seed1
Au0.397
Energy-23.9
Binding len20
Me-5.692
Phylopstem-0.23263615384615385
Phylopflank-0.2591802742500001
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure