Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCCAGAGCTGCTGCTGCAGA
(((((((.((((((.(..(((&)))..).)))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_152540
GeneSymbolSCFD2
Binding site744,766
Score0.923
Seed1
Au0.441
Energy-23.3
Binding len22
Me-6.987
Phylopstem0.8839556714285716
Phylopflank-0.060181059999999995
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure