Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTAAGCTCCCGCCTGCTGCAGG
(((((((.((((..((..(((&)))..))..))))..))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_152542
GeneSymbolPPM1K
Binding site280,303
Score0.846
Seed1
Au0.353
Energy-21.7
Binding len23
Me-8.397
Phylopstem0.13657328571428576
Phylopflank0.21669041499999997
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure