Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTACACGTTGGCCCAGCAGCTGA
...(((((((((((((((((.&))))))).....)))..))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_152545
GeneSymbolRASGEF1B
Binding site759,784
Score0.846
Seed0
Au0.485
Energy-22.9
Binding len25
Me-6.515
Phylopstem2.0495843666666667
Phylopflank1.56326236625
Longest consecutive pairings7
Position of longest consecutive pairings18
Pairings in 3prime end7
PositionCDS
2D Structure