Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TCTTGCCCTGGCCTCCCATGTAGCTGCAAC
((((((((((((((((((((.&))))))...))))......)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_152551
GeneSymbolSNRNP48
Binding site3350,3380
Score1.0
Seed1
Au0.441
Energy-21.8
Binding len30
Me-3.938
Phylopstem-0.014644758620689667
Phylopflank-0.12303079999999997
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure