Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TCTTAGGAGCTGCAGAAGGAAAACTGCAAT
((((((((((((((.(((((.&)))))..))))))))........)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_152562
GeneSymbolCDCA2
Binding site2546,2576
Score1.0
Seed1
Au0.618
Energy-19.4
Binding len30
Me-4.673
Phylopstem0.010736677272727313
Phylopflank-0.04510988999999999
Longest consecutive pairings8
Position of longest consecutive pairings15
Pairings in 3prime end6
PositionCDS
2D Structure